Disease: Carcinoma of bladder
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2070584
TIMP1 ; MIR4769 ; SYN1
0.790 0.200 X 47587120 intron variant T/G snv 0.44 8
rs72552316
TLR7
0.882 0.120 X 12889591 3 prime UTR variant T/C snv 3
rs1014971 0.882 0.120 22 38936618 regulatory region variant C/T snv 0.55 3
rs2073859
LIMK2
0.882 0.120 22 31278567 3 prime UTR variant G/A snv 4.0E-02 4
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs56228771
SGSM3 ; MRTFA
0.827 0.200 22 40410091 3 prime UTR variant -/GTCT;GTCTGTCT delins 5
rs9619311
TIMP3 ; SYN3
0.851 0.160 22 32800707 intron variant T/C snv 0.40 4
rs9624880
GRK3
0.882 0.120 22 25588025 intron variant C/T snv 3
rs2836007
KCNJ6
0.925 0.120 21 37834589 intron variant C/T snv 0.21 2
rs17576
MMP9
0.557 0.760 20 46011586 missense variant A/G snv 0.39 0.36 73
rs2250889
SLC12A5-AS1 ; MMP9
0.667 0.520 20 46013767 missense variant G/C;T snv 0.88; 1.6E-05 24
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs3918242
MMP9
0.602 0.680 20 46007337 upstream gene variant C/T snv 0.14 54
rs6104690
LINC02871
0.925 0.120 20 11007451 intron variant G/A;T snv 2
rs62185668 0.925 0.120 20 10981287 intron variant C/A snv 0.19 3
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06 50
rs11671784
MIR24-2 ; LOC284454 ; MIR23A ; MIR27A
0.790 0.240 19 13836482 non coding transcript exon variant G/A snv 1.2E-02 1.2E-02 9
rs1189516787
CEBPA ; CEBPA-DT
0.882 0.120 19 33301681 missense variant C/G snv 7.1E-06 3
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs1799793
ERCC2
0.557 0.640 19 45364001 missense variant C/A;T snv 7.1E-06; 0.29 72
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs1800471
TGFB1
0.597 0.840 19 41352971 missense variant C/G;T snv 5.6E-02 48
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78